Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Mir1249-201ENSMUST00000116791 98 ntBASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sh3rf2Q8BZT2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sh3rf2Q8BZT2 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gm15031-201ENSMUST00000121341 210 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gm37197-201ENSMUST00000195607 401 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Wbp1-209ENSMUST00000205023 716 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gm18466-201ENSMUST00000209147 499 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms