Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh8Q7TSK3 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.71□□□□□ -0.7
Pcdh8Q7TSK3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh8Q7TSK3 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh8Q7TSK3 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.71□□□□□ -0.7
Pcdh8Q7TSK3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh8Q7TSK3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.71□□□□□ -0.7
Pcdh8Q7TSK3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Gm13039-201ENSMUST00000118638 794 ntBASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Gm6478-201ENSMUST00000099450 742 ntBASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh8Q7TSK3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm12943-201ENSMUST00000119616 210 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm15136-201ENSMUST00000120552 533 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm9507-202ENSMUST00000180157 654 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm37852-201ENSMUST00000193027 350 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm42751-201ENSMUST00000198065 559 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm7902-201ENSMUST00000198842 947 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh8Q7TSK3 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms