Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Gm12337-201ENSMUST00000119634 400 ntBASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Gm5298-201ENSMUST00000201122 892 ntBASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Gm9102-201ENSMUST00000219250 465 ntBASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcc2Q6PDG5 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Mir1893-201ENSMUST00000122565 83 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm42660-201ENSMUST00000197733 947 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm44814-201ENSMUST00000207018 434 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm8162-201ENSMUST00000213951 665 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcc2Q6PDG5 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcc2Q6PDG5 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms