Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm21092-201ENSMUST00000178995 955 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm44323-201ENSMUST00000198689 129 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm43138-201ENSMUST00000199123 708 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm18042-201ENSMUST00000219887 790 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm9333-201ENSMUST00000205452 1323 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm9133-201ENSMUST00000118289 540 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm45398-201ENSMUST00000210561 165 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Mt1-202ENSMUST00000211807 1085 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Nsd1-205ENSMUST00000224693 852 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.88□□□□□ -0.83
Smarcd3Q6P9Z1 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Snord55-201ENSMUST00000174939 79 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Mir3102-201ENSMUST00000175555 104 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Gm30946-201ENSMUST00000198288 724 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Gm43378-201ENSMUST00000199336 582 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Gm18753-201ENSMUST00000201000 566 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smarcd3Q6P9Z1 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms