Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Mir453-201ENSMUST00000104732 82 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm10169-201ENSMUST00000121822 348 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm11434-201ENSMUST00000122379 629 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Mir1956-201ENSMUST00000157748 65 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm25554-201ENSMUST00000158075 113 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm38321-201ENSMUST00000195053 235 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm34023-201ENSMUST00000195539 217 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Nln-205ENSMUST00000224945 2486 ntBASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Syne3Q4FZC9 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Gm23061-201ENSMUST00000102348 116 ntBASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Gm14270-201ENSMUST00000118388 846 ntBASIC11.47□□□□□ -0.57
Syne3Q4FZC9 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.47□□□□□ -0.57
Syne3Q4FZC9 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms