Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rnf149Q3U2C5 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rnf149Q3U2C5 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rnf149Q3U2C5 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm14592-201ENSMUST00000117201 560 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm15329-201ENSMUST00000121408 155 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm8737-201ENSMUST00000122208 642 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm24844-201ENSMUST00000158679 127 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm7741-201ENSMUST00000181445 989 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm3786-201ENSMUST00000202659 378 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm8342-201ENSMUST00000209839 757 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm5996-201ENSMUST00000211110 718 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm2517-201ENSMUST00000215651 348 ntBASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf149Q3U2C5 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm12247-201ENSMUST00000117585 670 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm15374-201ENSMUST00000119313 844 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm23045-201ENSMUST00000175041 96 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm4654-201ENSMUST00000183305 982 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.67□□□□□ -0.86
Rnf149Q3U2C5 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms