Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm5526-201ENSMUST00000153604 423 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm25116-201ENSMUST00000157191 122 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm7445-201ENSMUST00000192115 340 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.71□□□□□ -0.53
Col9a2Q07643 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.71□□□□□ -0.54
Col9a2Q07643 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Col9a2Q07643 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Col9a2Q07643 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col9a2Q07643 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a2Q07643 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm23255-201ENSMUST00000102244 110 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm15554-201ENSMUST00000120406 913 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm7572-201ENSMUST00000182616 766 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm6644-201ENSMUST00000186507 951 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm28196-201ENSMUST00000187719 640 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm3527-201ENSMUST00000198905 460 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm43854-201ENSMUST00000200418 394 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm18123-201ENSMUST00000210874 822 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm18122-201ENSMUST00000211390 904 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Gm45893-201ENSMUST00000211899 247 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col9a2Q07643 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.7□□□□□ -0.54
Col9a2Q07643 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a2Q07643 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col9a2Q07643 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.69□□□□□ -0.54
Col9a2Q07643 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.69□□□□□ -0.54
Col9a2Q07643 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col9a2Q07643 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms