Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Lsm6P62313 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm6P62313 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Lsm6P62313 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Lsm6P62313 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.5□□□□□ -0.89
Lsm6P62313 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm6P62313 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.5□□□□□ -0.89
Lsm6P62313 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Lsm6P62313 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Lsm6P62313 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Mir453-201ENSMUST00000104732 82 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Lsm6P62313 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.5□□□□□ -0.89
Lsm6P62313 Mir1943-201ENSMUST00000158276 73 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Gm5244-201ENSMUST00000164001 339 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm44329-201ENSMUST00000197469 112 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Gm43671-201ENSMUST00000200422 433 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Gm18466-201ENSMUST00000209147 499 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.5□□□□□ -0.89
Lsm6P62313 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm44999-201ENSMUST00000207456 1493 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm13384-201ENSMUST00000117166 1344 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm6P62313 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm6P62313 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.5□□□□□ -0.89
Lsm6P62313 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.5□□□□□ -0.89
Lsm6P62313 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Lsm6P62313 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms