Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 CT030170.2-201ENSMUST00000223267 126 ntBASIC12□□□□□ -0.49
Tpm1P58771 CT573047.1-201ENSMUST00000223652 851 ntBASIC12□□□□□ -0.49
Tpm1P58771 Rassf8-202ENSMUST00000058538 1131 ntBASIC12□□□□□ -0.49
Tpm1P58771 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tpm1P58771 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tpm1P58771 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12□□□□□ -0.49
Tpm1P58771 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC12□□□□□ -0.49
Tpm1P58771 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tpm1P58771 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tpm1P58771 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Tpm1P58771 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC12□□□□□ -0.49
Tpm1P58771 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tpm1P58771 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC12□□□□□ -0.49
Tpm1P58771 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Gm43112-201ENSMUST00000196665 3122 ntBASIC12□□□□□ -0.49
Tpm1P58771 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12□□□□□ -0.49
Tpm1P58771 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Tpm1P58771 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tpm1P58771 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC11.99□□□□□ -0.49
Tpm1P58771 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.99□□□□□ -0.49
Tpm1P58771 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.99□□□□□ -0.49
Tpm1P58771 Gm12266-201ENSMUST00000120311 962 ntBASIC11.99□□□□□ -0.49
Tpm1P58771 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.99□□□□□ -0.49
Tpm1P58771 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.99□□□□□ -0.49
Tpm1P58771 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.99□□□□□ -0.49
Tpm1P58771 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Tpm1P58771 Gm5733-201ENSMUST00000190232 939 ntBASIC11.99□□□□□ -0.49
Tpm1P58771 Gm29067-201ENSMUST00000190821 470 ntBASIC11.99□□□□□ -0.49
Tpm1P58771 Gm43179-201ENSMUST00000198797 275 ntBASIC11.99□□□□□ -0.49
Tpm1P58771 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.99□□□□□ -0.49
Tpm1P58771 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tpm1P58771 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.99□□□□□ -0.49
Tpm1P58771 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tpm1P58771 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tpm1P58771 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.99□□□□□ -0.49
Tpm1P58771 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tpm1P58771 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC11.99□□□□□ -0.49
Tpm1P58771 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.99□□□□□ -0.49
Tpm1P58771 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tpm1P58771 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 Gm14193-201ENSMUST00000105067 153 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 Gm13809-201ENSMUST00000117921 597 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.98□□□□□ -0.49
Tpm1P58771 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Tpm1P58771 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Mir7051-201ENSMUST00000184167 73 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Gm2517-201ENSMUST00000215651 348 ntBASIC11.98□□□□□ -0.49
Tpm1P58771 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.98□□□□□ -0.49
Tpm1P58771 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tpm1P58771 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 AC121574.1-201ENSMUST00000228770 3132 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms