Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm6098-201ENSMUST00000180234 330 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm5597-201ENSMUST00000182353 1193 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm7255-201ENSMUST00000187371 908 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm43084-201ENSMUST00000200696 947 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm44872-201ENSMUST00000207864 420 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm7594-201ENSMUST00000218595 871 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm9004-201ENSMUST00000218739 1222 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm37909-201ENSMUST00000193157 2159 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Nrp2-201ENSMUST00000027112 4216 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Dab2-202ENSMUST00000080880 4663 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Gm37697-201ENSMUST00000195680 1844 ntBASIC8.36□□□□□ -1.07
Ctdsp1P58466 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC8.36□□□□□ -1.07
Ctdsp1P58466 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gm4366-201ENSMUST00000201488 1342 ntBASIC8.35□□□□□ -1.07
Ctdsp1P58466 Helb-201ENSMUST00000020449 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gm43058-201ENSMUST00000197645 625 ntBASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gm19091-201ENSMUST00000208120 978 ntBASIC8.35□□□□□ -1.07
Ctdsp1P58466 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gm7061-201ENSMUST00000118127 1416 ntBASIC8.35□□□□□ -1.07
Ctdsp1P58466 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC8.35□□□□□ -1.07
Ctdsp1P58466 AC133934.1-201ENSMUST00000223052 1761 ntBASIC8.35□□□□□ -1.07
Ctdsp1P58466 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ctdsp1P58466 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Ctdsp1P58466 AC153940.1-201ENSMUST00000220149 5300 ntBASIC8.34□□□□□ -1.07
Ctdsp1P58466 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ctdsp1P58466 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Gm37160-201ENSMUST00000193081 1689 ntBASIC8.34□□□□□ -1.07
Ctdsp1P58466 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Rab44-201ENSMUST00000087942 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Ctdsp1P58466 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms