Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rrp1P56183 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rrp1P56183 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rrp1P56183 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rrp1P56183 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Rrp1P56183 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 AC117648.1-201ENSMUST00000219777 2510 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Gm12663-201ENSMUST00000118481 958 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 Gm13045-201ENSMUST00000119019 712 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 Mir1893-201ENSMUST00000122565 83 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 Gm16165-201ENSMUST00000160140 795 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.14□□□□□ -0.47
Rrp1P56183 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rrp1P56183 Gm9211-201ENSMUST00000182882 975 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rrp1P56183 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.14□□□□□ -0.47
Rrp1P56183 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.14□□□□□ -0.47
Rrp1P56183 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Rrp1P56183 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.14□□□□□ -0.47
Rrp1P56183 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rrp1P56183 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Rrp1P56183 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrp1P56183 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rrp1P56183 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rrp1P56183 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12616-201ENSMUST00000118594 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12624-201ENSMUST00000177615 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12621-201ENSMUST00000177760 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12615-201ENSMUST00000177970 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12622-201ENSMUST00000177975 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12627-201ENSMUST00000178412 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12625-201ENSMUST00000179122 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12614-201ENSMUST00000179586 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Gm12613-201ENSMUST00000180323 382 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm8197-202ENSMUST00000193422 934 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.13□□□□□ -0.47
Rrp1P56183 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm7319-201ENSMUST00000210047 778 ntBASIC12.13□□□□□ -0.47
Rrp1P56183 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rrp1P56183 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms