Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.81□□□□□ -0.68
Atxn1P54254 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atxn1P54254 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atxn1P54254 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.81□□□□□ -0.68
Atxn1P54254 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm8464-202ENSMUST00000146697 1142 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm4750-201ENSMUST00000151942 1142 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 Gm18733-202ENSMUST00000174447 401 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atxn1P54254 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.81□□□□□ -0.68
Atxn1P54254 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atxn1P54254 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atxn1P54254 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Atxn1P54254 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm9095-201ENSMUST00000117607 881 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm9097-201ENSMUST00000120514 880 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Gm14829-201ENSMUST00000121499 1138 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Gm16441-201ENSMUST00000138176 924 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Atxn1P54254 Mir7088-201ENSMUST00000184227 86 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm37723-201ENSMUST00000194480 565 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Gm42689-201ENSMUST00000202403 404 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.8□□□□□ -0.68
Atxn1P54254 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC10.8□□□□□ -0.68
Atxn1P54254 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm5278-201ENSMUST00000055957 552 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.8□□□□□ -0.68
Atxn1P54254 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
Atxn1P54254 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms