Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.76□□□□□ -0.69
Sox18P43680 Gm29354-201ENSMUST00000187613 696 ntBASIC10.76□□□□□ -0.69
Sox18P43680 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.76□□□□□ -0.69
Sox18P43680 Gm28648-201ENSMUST00000190092 343 ntBASIC10.76□□□□□ -0.69
Sox18P43680 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC10.76□□□□□ -0.69
Sox18P43680 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.76□□□□□ -0.69
Sox18P43680 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm42438-201ENSMUST00000197832 974 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm44323-201ENSMUST00000198689 129 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC10.76□□□□□ -0.69
Sox18P43680 Gm43136-201ENSMUST00000200403 636 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Gm44814-201ENSMUST00000207018 434 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm5650-201ENSMUST00000209641 598 ntBASIC10.76□□□□□ -0.69
Sox18P43680 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Sox18P43680 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 AL645546.2-201ENSMUST00000224526 265 ntBASIC10.76□□□□□ -0.69
Sox18P43680 AC131117.1-201ENSMUST00000225154 1171 ntBASIC10.76□□□□□ -0.69
Sox18P43680 AC103672.1-201ENSMUST00000227502 365 ntBASIC10.76□□□□□ -0.69
Sox18P43680 AC121912.1-201ENSMUST00000227525 1201 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sox18P43680 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm42968-201ENSMUST00000198578 1372 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.75□□□□□ -0.69
Sox18P43680 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sox18P43680 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Sox18P43680 Gm13281-201ENSMUST00000120871 567 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.75□□□□□ -0.69
Sox18P43680 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Gm13874-202ENSMUST00000135348 941 ntTSL 3 BASIC10.75□□□□□ -0.69
Sox18P43680 Gm25394-201ENSMUST00000157338 133 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.75□□□□□ -0.69
Sox18P43680 Gm21778-201ENSMUST00000178779 471 ntBASIC10.75□□□□□ -0.69
Sox18P43680 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Gm7572-201ENSMUST00000182616 766 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Gm26957-201ENSMUST00000182645 977 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Mir6359-201ENSMUST00000183668 81 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Gm8226-201ENSMUST00000190511 798 ntBASIC10.75□□□□□ -0.69
Sox18P43680 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Gm18547-201ENSMUST00000192439 811 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Gm36997-201ENSMUST00000195090 707 ntBASIC10.75□□□□□ -0.69
Sox18P43680 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Gm43866-201ENSMUST00000203894 839 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Gm44849-201ENSMUST00000207595 484 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC10.75□□□□□ -0.69
Sox18P43680 A1cf-203ENSMUST00000224400 1204 ntBASIC10.75□□□□□ -0.69
Sox18P43680 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Vmn1r89-206ENSMUST00000227319 985 ntBASIC10.75□□□□□ -0.69
Sox18P43680 AC134335.1-201ENSMUST00000227626 329 ntBASIC10.75□□□□□ -0.69
Sox18P43680 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.75□□□□□ -0.69
Sox18P43680 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sox18P43680 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sox18P43680 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.75□□□□□ -0.69
Sox18P43680 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Gm42766-201ENSMUST00000200233 1332 ntBASIC10.75□□□□□ -0.69
Sox18P43680 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox18P43680 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms