Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC8.86□□□□□ -0.99
VhlP40338 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC8.86□□□□□ -0.99
VhlP40338 Gm9785-201ENSMUST00000062642 1006 ntBASIC8.86□□□□□ -0.99
VhlP40338 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
VhlP40338 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Gm5403-201ENSMUST00000117105 2795 ntBASIC8.86□□□□□ -0.99
VhlP40338 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Gm12097-201ENSMUST00000121523 1414 ntBASIC8.86□□□□□ -0.99
VhlP40338 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC8.86□□□□□ -0.99
VhlP40338 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
VhlP40338 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC8.86□□□□□ -0.99
VhlP40338 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
VhlP40338 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Gm43868-201ENSMUST00000205187 2114 ntBASIC8.86□□□□□ -0.99
VhlP40338 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VhlP40338 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
VhlP40338 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
VhlP40338 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Gm43636-201ENSMUST00000201501 2235 ntBASIC8.85□□□□□ -0.99
VhlP40338 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
VhlP40338 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Gm43052-201ENSMUST00000201451 1628 ntBASIC8.85□□□□□ -0.99
VhlP40338 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Rims2-204ENSMUST00000226410 3685 ntBASIC8.85□□□□□ -0.99
VhlP40338 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Gm12986-201ENSMUST00000119037 967 ntBASIC8.85□□□□□ -0.99
VhlP40338 Gm12337-201ENSMUST00000119634 400 ntBASIC8.85□□□□□ -0.99
VhlP40338 Gm14208-201ENSMUST00000119645 678 ntBASIC8.85□□□□□ -0.99
VhlP40338 Gm12266-201ENSMUST00000120311 962 ntBASIC8.85□□□□□ -0.99
VhlP40338 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC8.85□□□□□ -0.99
VhlP40338 Gstp-ps-201ENSMUST00000195526 631 ntBASIC8.85□□□□□ -0.99
VhlP40338 Gm42682-201ENSMUST00000198349 1265 ntBASIC8.85□□□□□ -0.99
VhlP40338 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC8.85□□□□□ -0.99
VhlP40338 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
VhlP40338 Gm45186-201ENSMUST00000206874 478 ntBASIC8.85□□□□□ -0.99
VhlP40338 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC8.85□□□□□ -0.99
VhlP40338 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC8.85□□□□□ -0.99
VhlP40338 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
VhlP40338 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
VhlP40338 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
VhlP40338 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VhlP40338 Gm42571-201ENSMUST00000201197 2464 ntBASIC8.85□□□□□ -0.99
VhlP40338 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Gm9415-201ENSMUST00000200462 1321 ntBASIC8.84□□□□□ -0.99
VhlP40338 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
VhlP40338 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
VhlP40338 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC8.84□□□□□ -0.99
VhlP40338 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC8.84□□□□□ -0.99
VhlP40338 Gm7851-201ENSMUST00000117574 323 ntBASIC8.84□□□□□ -0.99
VhlP40338 Gm14395-201ENSMUST00000120494 563 ntBASIC8.84□□□□□ -0.99
VhlP40338 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
VhlP40338 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
VhlP40338 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC8.84□□□□□ -0.99
VhlP40338 Gm44270-201ENSMUST00000203084 1234 ntBASIC8.84□□□□□ -0.99
VhlP40338 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC8.84□□□□□ -0.99
VhlP40338 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC8.84□□□□□ -0.99
VhlP40338 Nsd1-205ENSMUST00000224693 852 ntBASIC8.84□□□□□ -0.99
VhlP40338 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VhlP40338 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms