Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.38□□□□□ -0.91
UbbP0CG49 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.38□□□□□ -0.91
UbbP0CG49 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.38□□□□□ -0.91
UbbP0CG49 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.38□□□□□ -0.91
UbbP0CG49 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.38□□□□□ -0.91
UbbP0CG49 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.38□□□□□ -0.91
UbbP0CG49 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.38□□□□□ -0.91
UbbP0CG49 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.38□□□□□ -0.91
UbbP0CG49 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.38□□□□□ -0.91
UbbP0CG49 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.38□□□□□ -0.91
UbbP0CG49 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
UbbP0CG49 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
UbbP0CG49 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.37□□□□□ -0.91
UbbP0CG49 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Gm14395-201ENSMUST00000120494 563 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.37□□□□□ -0.91
UbbP0CG49 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.37□□□□□ -0.91
UbbP0CG49 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Gm5865-201ENSMUST00000198713 637 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.37□□□□□ -0.91
UbbP0CG49 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
UbbP0CG49 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
UbbP0CG49 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.37□□□□□ -0.91
UbbP0CG49 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC9.37□□□□□ -0.91
UbbP0CG49 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
UbbP0CG49 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
UbbP0CG49 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.36□□□□□ -0.91
UbbP0CG49 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.36□□□□□ -0.91
UbbP0CG49 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms