Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.78□□□□□ -0.52
Chmp6P0C0A3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm12663-201ENSMUST00000118481 958 ntBASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm42660-201ENSMUST00000197733 947 ntBASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm3726-201ENSMUST00000203110 785 ntBASIC11.78□□□□□ -0.52
Chmp6P0C0A3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.78□□□□□ -0.52
Chmp6P0C0A3 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.78□□□□□ -0.52
Chmp6P0C0A3 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Chmp6P0C0A3 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm8492-201ENSMUST00000182375 987 ntBASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm43671-201ENSMUST00000200422 433 ntBASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp6P0C0A3 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms