Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
P04224 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
P04224 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
P04224 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.46□□□□□ -0.89
P04224 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC9.46□□□□□ -0.9
P04224 Gm23596-201ENSMUST00000104304 132 ntBASIC9.46□□□□□ -0.9
P04224 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Gm12857-201ENSMUST00000117678 592 ntBASIC9.46□□□□□ -0.9
P04224 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.46□□□□□ -0.9
P04224 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.46□□□□□ -0.9
P04224 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
P04224 Gm8815-201ENSMUST00000173809 620 ntBASIC9.46□□□□□ -0.9
P04224 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.46□□□□□ -0.9
P04224 Gm38151-201ENSMUST00000195085 289 ntBASIC9.46□□□□□ -0.9
P04224 Gm3961-201ENSMUST00000204425 994 ntBASIC9.46□□□□□ -0.9
P04224 Gm45433-201ENSMUST00000209386 247 ntBASIC9.46□□□□□ -0.9
P04224 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
P04224 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.46□□□□□ -0.9
P04224 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
P04224 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC9.46□□□□□ -0.9
P04224 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
P04224 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
P04224 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.46□□□□□ -0.9
P04224 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Gm38005-201ENSMUST00000194845 2745 ntBASIC9.46□□□□□ -0.9
P04224 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.46□□□□□ -0.9
P04224 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P04224 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 AC158777.1-201ENSMUST00000226216 1724 ntBASIC9.45□□□□□ -0.9
P04224 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.45□□□□□ -0.9
P04224 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.45□□□□□ -0.9
P04224 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Gm37608-201ENSMUST00000195696 1880 ntBASIC9.45□□□□□ -0.9
P04224 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.45□□□□□ -0.9
P04224 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.45□□□□□ -0.9
P04224 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
P04224 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.45□□□□□ -0.9
P04224 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.45□□□□□ -0.9
P04224 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.45□□□□□ -0.9
P04224 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.45□□□□□ -0.9
P04224 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.45□□□□□ -0.9
P04224 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
P04224 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
P04224 Gm27320-201ENSMUST00000184892 109 ntBASIC9.45□□□□□ -0.9
P04224 Gm4857-201ENSMUST00000192718 785 ntBASIC9.45□□□□□ -0.9
P04224 Gm5714-201ENSMUST00000197343 566 ntBASIC9.45□□□□□ -0.9
P04224 Gm43758-201ENSMUST00000199500 367 ntBASIC9.45□□□□□ -0.9
P04224 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Gm44262-201ENSMUST00000204969 372 ntBASIC9.45□□□□□ -0.9
P04224 Gm45575-201ENSMUST00000210283 548 ntBASIC9.45□□□□□ -0.9
P04224 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.45□□□□□ -0.9
P04224 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P04224 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.45□□□□□ -0.9
P04224 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
P04224 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
P04224 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC9.45□□□□□ -0.9
P04224 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P04224 AC165080.1-201ENSMUST00000215257 3123 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms