Protein–RNA interactions for Protein: P02830

Hoxa7, Homeobox protein Hox-A7, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa7P02830 Gm29543-201ENSMUST00000188138 967 ntBASIC13.04□□□□□ -0.32
Hoxa7P02830 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC13.04□□□□□ -0.32
Hoxa7P02830 Gm7082-201ENSMUST00000209880 969 ntBASIC13.04□□□□□ -0.32
Hoxa7P02830 Gm18035-201ENSMUST00000211962 589 ntBASIC13.04□□□□□ -0.32
Hoxa7P02830 Capsl-202ENSMUST00000226688 739 ntBASIC13.04□□□□□ -0.32
Hoxa7P02830 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Gm45719-201ENSMUST00000207954 1662 ntBASIC13.04□□□□□ -0.32
Hoxa7P02830 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa7P02830 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa7P02830 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa7P02830 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa7P02830 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa7P02830 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 AC140462.2-201ENSMUST00000225718 2433 ntBASIC13.03□□□□□ -0.32
Hoxa7P02830 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Hoxa7P02830 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxa7P02830 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 AC122367.1-201ENSMUST00000221978 1709 ntBASIC13.03□□□□□ -0.32
Hoxa7P02830 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 Mir291b-201ENSMUST00000104838 79 ntBASIC13.03□□□□□ -0.32
Hoxa7P02830 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa7P02830 Gm15285-201ENSMUST00000119271 473 ntBASIC13.03□□□□□ -0.32
Hoxa7P02830 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxa7P02830 Gm9372-201ENSMUST00000168454 430 ntBASIC13.03□□□□□ -0.32
Hoxa7P02830 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxa7P02830 Gm7593-201ENSMUST00000187246 644 ntBASIC13.03□□□□□ -0.32
Hoxa7P02830 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxa7P02830 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Hoxa7P02830 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxa7P02830 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 Gm42587-201ENSMUST00000198462 1981 ntBASIC13.03□□□□□ -0.32
Hoxa7P02830 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa7P02830 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxa7P02830 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC13.02□□□□□ -0.32
Hoxa7P02830 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hoxa7P02830 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.02□□□□□ -0.32
Hoxa7P02830 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hoxa7P02830 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hoxa7P02830 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa7P02830 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hoxa7P02830 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa7P02830 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Gm14807-201ENSMUST00000116640 983 ntBASIC13.02□□□□□ -0.33
Hoxa7P02830 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Gm26976-201ENSMUST00000182929 908 ntBASIC13.02□□□□□ -0.33
Hoxa7P02830 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa7P02830 Gm45219-201ENSMUST00000205602 465 ntBASIC13.02□□□□□ -0.33
Hoxa7P02830 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxa7P02830 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxa7P02830 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxa7P02830 AC134601.2-201ENSMUST00000221071 130 ntBASIC13.02□□□□□ -0.33
Hoxa7P02830 Atf7-201ENSMUST00000096143 390 ntBASIC13.02□□□□□ -0.33
Hoxa7P02830 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa7P02830 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa7P02830 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxa7P02830 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC13.02□□□□□ -0.33
Hoxa7P02830 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa7P02830 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.01□□□□□ -0.33
Hoxa7P02830 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa7P02830 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa7P02830 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa7P02830 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa7P02830 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa7P02830 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa7P02830 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Hoxa7P02830 AC117648.1-201ENSMUST00000219777 2510 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms