Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm4812-201ENSMUST00000182847 993 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm37436-201ENSMUST00000193842 1085 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm45310-201ENSMUST00000210436 275 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm7848-201ENSMUST00000210739 718 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm18042-201ENSMUST00000219887 790 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm5468-202ENSMUST00000227851 682 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.73□□□□□ -0.85
Pcdh1F7BJK1 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm4909-201ENSMUST00000118749 794 ntBASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Pcdh1F7BJK1 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms