Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm19121-201ENSMUST00000215720 1022 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm4866-201ENSMUST00000197408 589 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm8083-201ENSMUST00000203976 475 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm26205-201ENSMUST00000082907 134 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm7823-201ENSMUST00000120761 1623 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm37582-201ENSMUST00000192953 1409 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 AC116596.1-201ENSMUST00000228112 1762 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gm25723-201ENSMUST00000104530 126 ntBASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gm20694-201ENSMUST00000176943 404 ntBASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Trav9n-1-201ENSMUST00000185224 339 ntBASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gm44155-201ENSMUST00000203923 412 ntBASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gm7924-201ENSMUST00000203975 785 ntBASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gm18119-201ENSMUST00000219972 616 ntBASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1fQ9JIS7 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Gm12420-201ENSMUST00000119869 1048 ntBASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Gm4812-201ENSMUST00000182847 993 ntBASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 AC153153.1-201ENSMUST00000225803 793 ntBASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Gm16477-201ENSMUST00000085365 801 ntBASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Gm17415-201ENSMUST00000096427 789 ntBASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Gm11427-201ENSMUST00000117952 1696 ntBASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1fQ9JIS7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms