Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm12795-201ENSMUST00000117594 539 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm28032-201ENSMUST00000184104 96 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm28833-201ENSMUST00000189671 559 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm37365-201ENSMUST00000193109 409 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm45120-201ENSMUST00000208880 408 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm8255-201ENSMUST00000218693 305 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp2aQ9DB34 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 AA474408-201ENSMUST00000098110 3339 ntBASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm17192-201ENSMUST00000169031 511 ntBASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Capsl-202ENSMUST00000226688 739 ntBASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms