Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
U2af1Q9D883 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC14.21□□□□□ -0.13
U2af1Q9D883 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
U2af1Q9D883 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
U2af1Q9D883 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
U2af1Q9D883 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
U2af1Q9D883 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC14.21□□□□□ -0.13
U2af1Q9D883 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
U2af1Q9D883 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
U2af1Q9D883 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
U2af1Q9D883 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
U2af1Q9D883 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
U2af1Q9D883 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
U2af1Q9D883 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
U2af1Q9D883 Gm14113-201ENSMUST00000121399 976 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.2□□□□□ -0.14
U2af1Q9D883 Gm6425-201ENSMUST00000136332 790 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 Gm16547-201ENSMUST00000159474 293 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 Mir6941-201ENSMUST00000184711 59 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 Gm44498-201ENSMUST00000199509 111 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 Gm18466-201ENSMUST00000209147 499 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
U2af1Q9D883 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 AC154407.1-201ENSMUST00000226777 526 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
U2af1Q9D883 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
U2af1Q9D883 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Gm28624-201ENSMUST00000186430 2131 ntBASIC14.2□□□□□ -0.14
U2af1Q9D883 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
U2af1Q9D883 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
U2af1Q9D883 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC14.19□□□□□ -0.14
U2af1Q9D883 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm42521-201ENSMUST00000199190 2040 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 AC125374.1-201ENSMUST00000213573 1400 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC14.19□□□□□ -0.14
U2af1Q9D883 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm11996-201ENSMUST00000117538 915 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm11919-201ENSMUST00000117609 721 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm13039-201ENSMUST00000118638 794 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm42751-201ENSMUST00000198065 559 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.19□□□□□ -0.14
U2af1Q9D883 AC124581.2-201ENSMUST00000225459 282 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm45124-201ENSMUST00000206723 2755 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm5697-201ENSMUST00000122295 2482 ntBASIC14.19□□□□□ -0.14
U2af1Q9D883 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
U2af1Q9D883 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
U2af1Q9D883 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC14.18□□□□□ -0.14
U2af1Q9D883 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
U2af1Q9D883 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
U2af1Q9D883 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms