Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm12467-201ENSMUST00000117625 745 ntBASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm24990-201ENSMUST00000157406 323 ntBASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm7003-201ENSMUST00000195089 312 ntBASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm17825-201ENSMUST00000206836 794 ntBASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.02□□□□□ -0.81
Trim13Q9CYB0 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm4294-201ENSMUST00000105169 614 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm14592-201ENSMUST00000117201 560 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm14201-201ENSMUST00000117627 289 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm12997-201ENSMUST00000120207 640 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm25318-201ENSMUST00000122554 314 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm2260-201ENSMUST00000184965 657 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm29499-201ENSMUST00000189151 486 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm28329-201ENSMUST00000191208 689 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm29171-201ENSMUST00000191397 486 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 AC125539.1-202ENSMUST00000226449 670 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim13Q9CYB0 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms