Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp16Q99LG0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp16Q99LG0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp16Q99LG0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp16Q99LG0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp16Q99LG0 Gm5697-201ENSMUST00000122295 2482 ntBASIC13.8□□□□□ -0.2
Usp16Q99LG0 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC13.8□□□□□ -0.2
Usp16Q99LG0 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Usp16Q99LG0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm11996-201ENSMUST00000117538 915 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm13039-201ENSMUST00000118638 794 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm15031-201ENSMUST00000121341 210 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm12950-201ENSMUST00000121683 417 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm22876-201ENSMUST00000175450 298 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Usp16Q99LG0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Gm45124-201ENSMUST00000206723 2755 ntBASIC13.79□□□□□ -0.2
Usp16Q99LG0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp16Q99LG0 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm14113-201ENSMUST00000121399 976 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm13981-201ENSMUST00000122360 447 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Mir6941-201ENSMUST00000184711 59 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Ighv5-8-202ENSMUST00000191967 337 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm37723-201ENSMUST00000194480 565 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm42751-201ENSMUST00000198065 559 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm44155-201ENSMUST00000203923 412 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm37697-201ENSMUST00000195680 1844 ntBASIC13.78□□□□□ -0.2
Usp16Q99LG0 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp16Q99LG0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC13.78□□□□□ -0.2
Usp16Q99LG0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Usp16Q99LG0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp16Q99LG0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp16Q99LG0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp16Q99LG0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp16Q99LG0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp16Q99LG0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp16Q99LG0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp16Q99LG0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms