Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm5311-201ENSMUST00000203518 709 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 AC118639.1-202ENSMUST00000226957 653 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Gm16518-201ENSMUST00000117960 508 ntBASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Gm7805-201ENSMUST00000154348 448 ntBASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 AC117769.1-201ENSMUST00000224716 1120 ntBASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd2Q99JR8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm15636-201ENSMUST00000119205 668 ntBASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm14231-201ENSMUST00000120090 592 ntBASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm4462-201ENSMUST00000166453 492 ntBASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm5801-201ENSMUST00000182247 780 ntBASIC10.93□□□□□ -0.66
Smarcd2Q99JR8 Gm37851-201ENSMUST00000193871 889 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms