Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gm11949-201ENSMUST00000117640 372 ntBASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gm9062-201ENSMUST00000117712 727 ntBASIC11.17□□□□□ -0.62
Trim60Q8VI40 Mir1893-201ENSMUST00000122565 83 ntBASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.17□□□□□ -0.62
Trim60Q8VI40 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.17□□□□□ -0.62
Trim60Q8VI40 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim60Q8VI40 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm16518-201ENSMUST00000117960 508 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm14942-201ENSMUST00000119642 336 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 B9d1os-201ENSMUST00000137010 674 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm37986-201ENSMUST00000193285 383 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm18466-201ENSMUST00000209147 499 ntBASIC11.16□□□□□ -0.62
Trim60Q8VI40 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim60Q8VI40 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim60Q8VI40 Spcs1-203ENSMUST00000226374 592 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms