Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim29Q8R2Q0 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm13019-201ENSMUST00000120000 276 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm13117-201ENSMUST00000120894 691 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm12208-201ENSMUST00000122004 163 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm13182-201ENSMUST00000122241 312 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm8285-201ENSMUST00000208293 759 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm44551-201ENSMUST00000208804 171 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm9102-201ENSMUST00000219250 465 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim29Q8R2Q0 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm11667-201ENSMUST00000119828 486 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm42660-201ENSMUST00000197733 947 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm43671-201ENSMUST00000200422 433 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm39288-201ENSMUST00000210554 446 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms