Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm24368-201ENSMUST00000175388 106 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm37232-201ENSMUST00000194887 367 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm30055-201ENSMUST00000203175 803 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm18119-201ENSMUST00000219972 616 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 CU025215.1-201ENSMUST00000222986 603 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm8730-201ENSMUST00000076373 954 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Gm21963-201ENSMUST00000179519 330 ntBASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Gm43305-202ENSMUST00000225083 705 ntBASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nup98Q6PFD9 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm11427-201ENSMUST00000117952 1696 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Mir7088-201ENSMUST00000184227 86 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm45090-201ENSMUST00000208775 1148 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm45728-201ENSMUST00000211475 2979 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm13192-201ENSMUST00000101199 208 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms