Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smarcd3Q6P9Z1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm12165-201ENSMUST00000117047 342 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm13422-201ENSMUST00000118834 504 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm12986-201ENSMUST00000119037 967 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm8737-201ENSMUST00000122208 642 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm23045-201ENSMUST00000175041 96 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Mir5132-201ENSMUST00000175166 71 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smarcd3Q6P9Z1 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smarcd3Q6P9Z1 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.9□□□□□ -0.83
Smarcd3Q6P9Z1 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Smarcd3Q6P9Z1 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smarcd3Q6P9Z1 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Smarcd3Q6P9Z1 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Smarcd3Q6P9Z1 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.9□□□□□ -0.83
Smarcd3Q6P9Z1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smarcd3Q6P9Z1 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm15264-201ENSMUST00000118050 502 ntBASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smarcd3Q6P9Z1 Gm12566-201ENSMUST00000121479 359 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms