Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Gm12516-201ENSMUST00000120819 385 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Gm29410-201ENSMUST00000188383 694 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Gm5100-201ENSMUST00000195631 589 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp49Q6P9L4 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usp49Q6P9L4 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Usp49Q6P9L4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usp49Q6P9L4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm25562-201ENSMUST00000104608 133 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm12274-201ENSMUST00000120062 385 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm12030-201ENSMUST00000121917 223 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm25072-201ENSMUST00000175233 235 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm8170-201ENSMUST00000218581 945 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm19009-201ENSMUST00000223072 823 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Spata33-207ENSMUST00000212760 4074 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Usp49Q6P9L4 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Mir453-201ENSMUST00000104732 82 ntBASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Gm16518-201ENSMUST00000117960 508 ntBASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.07□□□□□ -0.48
Usp49Q6P9L4 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms