Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Znf48Q3US17 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Znf48Q3US17 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Znf48Q3US17 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Znf48Q3US17 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Znf48Q3US17 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Znf48Q3US17 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Znf48Q3US17 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Znf48Q3US17 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Znf48Q3US17 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Znf48Q3US17 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Znf48Q3US17 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Znf48Q3US17 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Znf48Q3US17 Atp6v1h-205ENSMUST00000192847 1662 ntTSL 5 BASIC9.36□□□□□ -0.91
Znf48Q3US17 Gm9877-201ENSMUST00000064271 2627 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm12586-201ENSMUST00000117328 1316 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm16071-201ENSMUST00000119589 793 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm7722-201ENSMUST00000120646 741 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm15566-201ENSMUST00000121130 590 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm14253-201ENSMUST00000122112 639 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm11834-201ENSMUST00000122257 585 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm19791-201ENSMUST00000180398 859 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm28388-201ENSMUST00000186262 437 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm5621-201ENSMUST00000187303 640 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm5066-201ENSMUST00000188479 822 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm17826-201ENSMUST00000189720 798 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Platr10-202ENSMUST00000191479 818 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm43520-201ENSMUST00000197996 164 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm2875-201ENSMUST00000211333 360 ntBASIC9.35□□□□□ -0.91
Znf48Q3US17 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Znf48Q3US17 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Znf48Q3US17 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Znf48Q3US17 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Znf48Q3US17 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Znf48Q3US17 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Znf48Q3US17 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Znf48Q3US17 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Znf48Q3US17 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Znf48Q3US17 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Znf48Q3US17 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms