Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 Gm44155-201ENSMUST00000203923 412 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 Klf10-203ENSMUST00000227920 2144 ntBASIC11.73□□□□□ -0.53
Col9a2Q07643 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col9a2Q07643 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a2Q07643 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.72□□□□□ -0.53
Col9a2Q07643 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm13857-201ENSMUST00000139645 173 ntBASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm12906-201ENSMUST00000154610 441 ntBASIC11.72□□□□□ -0.53
Col9a2Q07643 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm5254-201ENSMUST00000188353 977 ntBASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm8918-201ENSMUST00000190587 1087 ntBASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm7238-201ENSMUST00000206467 973 ntBASIC11.72□□□□□ -0.53
Col9a2Q07643 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC11.72□□□□□ -0.53
Col9a2Q07643 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col9a2Q07643 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm23745-201ENSMUST00000104230 125 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm16518-201ENSMUST00000117960 508 ntBASIC11.71□□□□□ -0.53
Col9a2Q07643 Gm13204-201ENSMUST00000120110 821 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms