Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm45120-201ENSMUST00000208880 408 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm10752-201ENSMUST00000218348 729 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm9139-201ENSMUST00000218817 700 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Cdx4Q07424 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm21358-201ENSMUST00000191645 1659 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 AC109214.1-201ENSMUST00000219520 1372 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm16166-201ENSMUST00000118291 787 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm14740-201ENSMUST00000118538 1150 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm12129-201ENSMUST00000120104 1147 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm12899-201ENSMUST00000120565 551 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm6407-201ENSMUST00000176468 549 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm23694-201ENSMUST00000179335 110 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm8531-201ENSMUST00000188319 893 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm37905-201ENSMUST00000195310 341 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm42816-201ENSMUST00000198433 325 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm45758-201ENSMUST00000212448 1006 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 AC102368.1-201ENSMUST00000227161 892 ntBASIC8.4□□□□□ -1.06
Cdx4Q07424 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Cdx4Q07424 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cdx4Q07424 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Cdx4Q07424 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Cdx4Q07424 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 AC153380.1-201ENSMUST00000214959 2364 ntBASIC8.4□□□□□ -1.07
Cdx4Q07424 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cdx4Q07424 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms