Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC13.59□□□□□ -0.23
Smarcc1P97496 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcc1P97496 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Smarcc1P97496 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcc1P97496 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.58□□□□□ -0.24
Smarcc1P97496 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Smarcc1P97496 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.58□□□□□ -0.24
Smarcc1P97496 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC13.58□□□□□ -0.24
Smarcc1P97496 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Gm37009-201ENSMUST00000193297 361 ntBASIC13.58□□□□□ -0.24
Smarcc1P97496 Gm37860-201ENSMUST00000195380 1034 ntBASIC13.58□□□□□ -0.24
Smarcc1P97496 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.58□□□□□ -0.24
Smarcc1P97496 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smarcc1P97496 Mir341-201ENSMUST00000093593 96 ntBASIC13.58□□□□□ -0.24
Smarcc1P97496 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smarcc1P97496 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcc1P97496 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcc1P97496 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smarcc1P97496 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc1P97496 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Gm45719-201ENSMUST00000207954 1662 ntBASIC13.57□□□□□ -0.24
Smarcc1P97496 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcc1P97496 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.57□□□□□ -0.24
Smarcc1P97496 Gm38312-201ENSMUST00000195426 1746 ntBASIC13.57□□□□□ -0.24
Smarcc1P97496 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcc1P97496 Gm15626-201ENSMUST00000117478 868 ntBASIC13.57□□□□□ -0.24
Smarcc1P97496 Gm12435-201ENSMUST00000118949 1016 ntBASIC13.57□□□□□ -0.24
Smarcc1P97496 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC13.57□□□□□ -0.24
Smarcc1P97496 Gm6425-201ENSMUST00000136332 790 ntBASIC13.57□□□□□ -0.24
Smarcc1P97496 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Gm2474-201ENSMUST00000195162 559 ntBASIC13.57□□□□□ -0.24
Smarcc1P97496 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcc1P97496 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC13.57□□□□□ -0.24
Smarcc1P97496 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.57□□□□□ -0.24
Smarcc1P97496 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Smarcc1P97496 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcc1P97496 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc1P97496 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smarcc1P97496 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms