Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SftpbP50405 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.02□□□□□ -0.64
SftpbP50405 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpbP50405 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpbP50405 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpbP50405 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.02□□□□□ -0.64
SftpbP50405 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.02□□□□□ -0.64
SftpbP50405 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.02□□□□□ -0.65
SftpbP50405 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
SftpbP50405 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SftpbP50405 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SftpbP50405 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.02□□□□□ -0.65
SftpbP50405 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.02□□□□□ -0.65
SftpbP50405 Gm15432-201ENSMUST00000121106 195 ntBASIC11.02□□□□□ -0.65
SftpbP50405 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SftpbP50405 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Gm17831-201ENSMUST00000205579 900 ntBASIC11.02□□□□□ -0.65
SftpbP50405 Gm45398-201ENSMUST00000210561 165 ntBASIC11.02□□□□□ -0.65
SftpbP50405 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SftpbP50405 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.02□□□□□ -0.65
SftpbP50405 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.02□□□□□ -0.65
SftpbP50405 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
SftpbP50405 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpbP50405 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.01□□□□□ -0.65
SftpbP50405 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Gm15236-201ENSMUST00000117309 379 ntBASIC11.01□□□□□ -0.65
SftpbP50405 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.01□□□□□ -0.65
SftpbP50405 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.01□□□□□ -0.65
SftpbP50405 Mir6546-201ENSMUST00000184460 62 ntBASIC11.01□□□□□ -0.65
SftpbP50405 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.01□□□□□ -0.65
SftpbP50405 Gm19091-201ENSMUST00000208120 978 ntBASIC11.01□□□□□ -0.65
SftpbP50405 Gm31941-201ENSMUST00000209689 350 ntBASIC11.01□□□□□ -0.65
SftpbP50405 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.01□□□□□ -0.65
SftpbP50405 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.01□□□□□ -0.65
SftpbP50405 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.01□□□□□ -0.65
SftpbP50405 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
SftpbP50405 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SftpbP50405 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.01□□□□□ -0.65
SftpbP50405 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.01□□□□□ -0.65
SftpbP50405 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.01□□□□□ -0.65
SftpbP50405 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpbP50405 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SftpbP50405 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11□□□□□ -0.65
SftpbP50405 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SftpbP50405 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SftpbP50405 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SftpbP50405 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SftpbP50405 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11□□□□□ -0.65
SftpbP50405 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms