Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rfx3P48381 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Rfx3P48381 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.78□□□□□ -0.84
Rfx3P48381 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.78□□□□□ -0.84
Rfx3P48381 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.78□□□□□ -0.84
Rfx3P48381 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Rfx3P48381 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rfx3P48381 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.78□□□□□ -0.84
Rfx3P48381 Gm20426-201ENSMUST00000173657 440 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Mir8115-201ENSMUST00000184992 119 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Gm37826-201ENSMUST00000195329 322 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Gm9111-201ENSMUST00000219394 709 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Rfx3P48381 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.78□□□□□ -0.84
Rfx3P48381 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rfx3P48381 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rfx3P48381 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rfx3P48381 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rfx3P48381 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Rfx3P48381 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rfx3P48381 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.77□□□□□ -0.85
Rfx3P48381 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.77□□□□□ -0.85
Rfx3P48381 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm4917-201ENSMUST00000121452 650 ntBASIC9.77□□□□□ -0.85
Rfx3P48381 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.77□□□□□ -0.85
Rfx3P48381 Mir1943-201ENSMUST00000158276 73 ntBASIC9.77□□□□□ -0.85
Rfx3P48381 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm27441-201ENSMUST00000185000 105 ntBASIC9.77□□□□□ -0.85
Rfx3P48381 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm3551-201ENSMUST00000190750 664 ntBASIC9.77□□□□□ -0.85
Rfx3P48381 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rfx3P48381 Gm45398-201ENSMUST00000210561 165 ntBASIC9.77□□□□□ -0.85
Rfx3P48381 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms