Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 Gm37671-201ENSMUST00000193198 2096 ntBASIC9.87□□□□□ -0.83
Nedd8P29595 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm42879-201ENSMUST00000198656 2214 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Aplf-202ENSMUST00000065997 3132 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nedd8P29595 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm12337-201ENSMUST00000119634 400 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.86□□□□□ -0.83
Nedd8P29595 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm4812-201ENSMUST00000182847 993 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm5996-201ENSMUST00000211110 718 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Gm9860-201ENSMUST00000211426 3653 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Gm17827-201ENSMUST00000211825 742 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm18935-201ENSMUST00000212692 664 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 AC159819.3-201ENSMUST00000216940 1837 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.86□□□□□ -0.83
Nedd8P29595 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC9.86□□□□□ -0.83
Nedd8P29595 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nedd8P29595 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nedd8P29595 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Nedd8P29595 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nedd8P29595 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC9.85□□□□□ -0.83
Nedd8P29595 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.85□□□□□ -0.83
Nedd8P29595 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.85□□□□□ -0.83
Nedd8P29595 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nedd8P29595 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Nedd8P29595 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nedd8P29595 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Nedd8P29595 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Nedd8P29595 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms