Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pde6aP27664 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Pde6aP27664 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.54□□□□□ -0.4
Pde6aP27664 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pde6aP27664 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pde6aP27664 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.54□□□□□ -0.4
Pde6aP27664 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6aP27664 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.53□□□□□ -0.4
Pde6aP27664 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.53□□□□□ -0.4
Pde6aP27664 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Pde6aP27664 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Pde6aP27664 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pde6aP27664 Gm15554-201ENSMUST00000120406 913 ntBASIC12.53□□□□□ -0.4
Pde6aP27664 Gm15031-201ENSMUST00000121341 210 ntBASIC12.53□□□□□ -0.4
Pde6aP27664 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Gm6425-201ENSMUST00000136332 790 ntBASIC12.53□□□□□ -0.4
Pde6aP27664 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.53□□□□□ -0.4
Pde6aP27664 Gm25226-201ENSMUST00000158198 123 ntBASIC12.53□□□□□ -0.4
Pde6aP27664 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.53□□□□□ -0.4
Pde6aP27664 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.53□□□□□ -0.4
Pde6aP27664 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.53□□□□□ -0.4
Pde6aP27664 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pde6aP27664 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pde6aP27664 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Pde6aP27664 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6aP27664 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pde6aP27664 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pde6aP27664 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6aP27664 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.52□□□□□ -0.4
Pde6aP27664 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6aP27664 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pde6aP27664 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6aP27664 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pde6aP27664 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6aP27664 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pde6aP27664 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.52□□□□□ -0.4
Pde6aP27664 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6aP27664 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6aP27664 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.52□□□□□ -0.41
Pde6aP27664 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.52□□□□□ -0.41
Pde6aP27664 Gm15264-201ENSMUST00000118050 502 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Gm24346-201ENSMUST00000158712 194 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Gm22876-201ENSMUST00000175450 298 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Gm6423-201ENSMUST00000204315 934 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Gm4903-201ENSMUST00000210462 405 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Pde6aP27664 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms