Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm13047-201ENSMUST00000117116 815 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm14113-201ENSMUST00000121399 976 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.18□□□□□ -0.62
Nfkb1P25799 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 BC043934-202ENSMUST00000185694 2356 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.18□□□□□ -0.62
Nfkb1P25799 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nfkb1P25799 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nfkb1P25799 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm12745-201ENSMUST00000121767 214 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm16547-201ENSMUST00000159474 293 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm24312-201ENSMUST00000178677 119 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm28032-201ENSMUST00000184104 96 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm27440-201ENSMUST00000184785 107 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm6439-201ENSMUST00000199849 862 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm29763-201ENSMUST00000205306 616 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.17□□□□□ -0.62
Nfkb1P25799 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nfkb1P25799 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms