Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
P20040 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P20040 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
P20040 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC9.63□□□□□ -0.87
P20040 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.63□□□□□ -0.87
P20040 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
P20040 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P20040 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P20040 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
P20040 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
P20040 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P20040 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
P20040 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
P20040 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
P20040 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.62□□□□□ -0.87
P20040 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.62□□□□□ -0.87
P20040 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
P20040 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.62□□□□□ -0.87
P20040 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Gm23061-201ENSMUST00000102348 116 ntBASIC9.62□□□□□ -0.87
P20040 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.62□□□□□ -0.87
P20040 Gm11892-201ENSMUST00000117711 1202 ntBASIC9.62□□□□□ -0.87
P20040 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.62□□□□□ -0.87
P20040 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.62□□□□□ -0.87
P20040 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.62□□□□□ -0.87
P20040 Gm8365-201ENSMUST00000197334 648 ntBASIC9.62□□□□□ -0.87
P20040 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.62□□□□□ -0.87
P20040 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.62□□□□□ -0.87
P20040 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.62□□□□□ -0.87
P20040 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC9.62□□□□□ -0.87
P20040 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.62□□□□□ -0.87
P20040 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC9.62□□□□□ -0.87
P20040 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.62□□□□□ -0.87
P20040 Gm5468-202ENSMUST00000227851 682 ntBASIC9.62□□□□□ -0.87
P20040 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
P20040 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
P20040 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
P20040 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
P20040 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
P20040 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P20040 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.61□□□□□ -0.87
P20040 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
P20040 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
P20040 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.61□□□□□ -0.87
P20040 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Gm13384-201ENSMUST00000117166 1344 ntBASIC9.61□□□□□ -0.87
P20040 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
P20040 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
P20040 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.61□□□□□ -0.87
P20040 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
P20040 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.61□□□□□ -0.87
P20040 Gm12208-201ENSMUST00000122004 163 ntBASIC9.61□□□□□ -0.87
P20040 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.61□□□□□ -0.87
P20040 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
P20040 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Gm23694-201ENSMUST00000179335 110 ntBASIC9.61□□□□□ -0.87
P20040 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P20040 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.61□□□□□ -0.87
P20040 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms