Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm22146-201ENSMUST00000157397 288 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Ighv2-1-201ENSMUST00000170946 353 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Gm3433-201ENSMUST00000210149 1058 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Gm6390-201ENSMUST00000215034 589 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Capsl-202ENSMUST00000226688 739 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 Gm26670-202ENSMUST00000226862 340 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Gm10020-201ENSMUST00000081993 612 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Hoxa3P02831 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.12□□□□□ -0.95
Hoxa3P02831 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Hoxa3P02831 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Hoxa3P02831 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm11619-201ENSMUST00000117474 237 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm14165-201ENSMUST00000121456 952 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm25951-201ENSMUST00000175330 64 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.11□□□□□ -0.95
Hoxa3P02831 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm43249-201ENSMUST00000200464 458 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.11□□□□□ -0.95
Hoxa3P02831 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Hoxa3P02831 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxa3P02831 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.11□□□□□ -0.95
Hoxa3P02831 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms