Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm14524-201ENSMUST00000121066 683 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm15373-201ENSMUST00000121495 214 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm18621-201ENSMUST00000222677 679 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 AC163646.3-201ENSMUST00000228879 772 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Syngap1F6SEU4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm5178-201ENSMUST00000219380 898 ntBASIC12.23□□□□□ -0.45
Syngap1F6SEU4 AC192333.3-201ENSMUST00000224041 463 ntBASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm10020-201ENSMUST00000081993 612 ntBASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syngap1F6SEU4 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms