Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm45728-201ENSMUST00000211475 2979 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm15661-201ENSMUST00000117390 556 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Defa-ps16-201ENSMUST00000121939 171 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm7815-201ENSMUST00000196104 832 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm44547-201ENSMUST00000207793 1446 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm7001-201ENSMUST00000219384 1465 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm5071-201ENSMUST00000104922 1035 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm6141-201ENSMUST00000117181 695 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm37486-201ENSMUST00000195663 405 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm43965-201ENSMUST00000203779 789 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm8256-202ENSMUST00000227964 828 ntBASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col4a6B1AVK5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Gm8806-201ENSMUST00000120076 1407 ntBASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col4a6B1AVK5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms