Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Gm3880A0A1B0GSB3 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3880A0A1B0GSB3 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3880A0A1B0GSB3 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Gm3880A0A1B0GSB3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Snx31-201ENSMUST00000013755 2696 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm29170-201ENSMUST00000190224 3666 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Olfr1221-203ENSMUST00000213404 2778 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 AC121860.1-201ENSMUST00000227908 2787 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Bcas1-202ENSMUST00000068137 2769 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Rhbdf2-201ENSMUST00000103028 3855 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cdc25b-202ENSMUST00000079857 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Fbxo34-204ENSMUST00000165714 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cdkl5-201ENSMUST00000087104 3269 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gfpt1-201ENSMUST00000032057 2286 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm28321-201ENSMUST00000187677 2327 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Tmem106a-202ENSMUST00000100403 2428 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cd22-210ENSMUST00000189718 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Snord83b-201ENSMUST00000104546 94 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm12314-201ENSMUST00000118104 538 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm13492-201ENSMUST00000119772 665 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm16479-201ENSMUST00000121706 932 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm16342-201ENSMUST00000124025 1025 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm9192-201ENSMUST00000183221 985 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm27533-201ENSMUST00000183800 152 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 AC161829.1-201ENSMUST00000220298 281 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 AC154222.1-201ENSMUST00000223882 475 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 AC155252.2-201ENSMUST00000226946 680 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Slc4a2-203ENSMUST00000115049 3924 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gabrb2-201ENSMUST00000007797 3989 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm43323-201ENSMUST00000202328 4258 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Gm13517-201ENSMUST00000120782 1495 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 AC155245.1-201ENSMUST00000222266 1804 ntBASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Ugt8a-201ENSMUST00000057944 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Lysmd4-204ENSMUST00000207823 3772 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cd22-201ENSMUST00000019248 3974 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Samd15-202ENSMUST00000182869 2031 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Gm3880A0A1B0GSB3 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Gm3880A0A1B0GSB3 Ttc16-205ENSMUST00000161089 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Gm3880A0A1B0GSB3 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Gm3880A0A1B0GSB3 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms