Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm9372-201ENSMUST00000168454 430 ntBASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Gm22876-201ENSMUST00000175450 298 ntBASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Gm42710-201ENSMUST00000200608 985 ntBASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Gm44605-201ENSMUST00000206892 949 ntBASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Gm31941-201ENSMUST00000209689 350 ntBASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Upk3aQ9JKX8 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm15031-201ENSMUST00000121341 210 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm8723-201ENSMUST00000166076 820 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm8701-201ENSMUST00000169259 874 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm18733-202ENSMUST00000174447 401 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm4812-201ENSMUST00000182847 993 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm43912-201ENSMUST00000204352 538 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Spata33-207ENSMUST00000212760 4074 ntBASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk3aQ9JKX8 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm5764-201ENSMUST00000118817 885 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm14234-201ENSMUST00000119539 845 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk3aQ9JKX8 Gm9574-201ENSMUST00000173127 845 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms