Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm23521-201ENSMUST00000177845 110 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm20474-201ENSMUST00000180089 596 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm26532-201ENSMUST00000180630 690 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm12736-201ENSMUST00000119330 236 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm12733-201ENSMUST00000119871 767 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm3945-201ENSMUST00000196637 683 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 AC242269.1-201ENSMUST00000227020 741 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm9790-201ENSMUST00000054148 288 ntBASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1fQ9JIS7 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Gm15373-201ENSMUST00000121495 214 ntBASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Gm42780-201ENSMUST00000197083 734 ntBASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1fQ9JIS7 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.15□□□□□ -0.47
Cacna1fQ9JIS7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Cacna1fQ9JIS7 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cacna1fQ9JIS7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cacna1fQ9JIS7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cacna1fQ9JIS7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.47
Cacna1fQ9JIS7 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm11929-201ENSMUST00000118175 945 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm15132-201ENSMUST00000118581 652 ntBASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.14□□□□□ -0.47
Cacna1fQ9JIS7 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms