Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm7525-201ENSMUST00000219425 454 ntBASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp2aQ9DB34 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm11380-201ENSMUST00000118067 560 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm18776-201ENSMUST00000188833 654 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm10752-201ENSMUST00000218348 729 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm18042-201ENSMUST00000219887 790 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp2aQ9DB34 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm22442-201ENSMUST00000157256 144 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm24074-201ENSMUST00000158178 260 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm26976-201ENSMUST00000182929 908 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Platr10-202ENSMUST00000191479 818 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm18514-201ENSMUST00000218980 436 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Gm5805-201ENSMUST00000072779 456 ntBASIC11.3□□□□□ -0.6
Chmp2aQ9DB34 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms