Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh15Q99PJ1 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh15Q99PJ1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh15Q99PJ1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh15Q99PJ1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh15Q99PJ1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh15Q99PJ1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh15Q99PJ1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gm14630-201ENSMUST00000118057 246 ntBASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gm12529-201ENSMUST00000119529 268 ntBASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gm8203-201ENSMUST00000173192 387 ntBASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gm17806-201ENSMUST00000195844 383 ntBASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gm5189-201ENSMUST00000221796 261 ntBASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh15Q99PJ1 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Gm24352-201ENSMUST00000158966 125 ntBASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Gm7565-201ENSMUST00000203611 623 ntBASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Pcdh15Q99PJ1 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm24471-201ENSMUST00000104485 131 ntBASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm13551-201ENSMUST00000121286 430 ntBASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm14138-201ENSMUST00000122061 745 ntBASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm12424-201ENSMUST00000179673 447 ntBASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm44920-201ENSMUST00000206503 746 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 AC167019.2-201ENSMUST00000227335 845 ntBASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm4925-201ENSMUST00000092231 397 ntBASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh15Q99PJ1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh15Q99PJ1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh15Q99PJ1 AC139845.1-201ENSMUST00000147013 1334 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh15Q99PJ1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh15Q99PJ1 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdh15Q99PJ1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh15Q99PJ1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh15Q99PJ1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh15Q99PJ1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms