Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm5092-201ENSMUST00000188185 1675 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm12817-201ENSMUST00000119622 610 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm26356-201ENSMUST00000158217 283 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm8704-201ENSMUST00000197181 435 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm43551-201ENSMUST00000197221 440 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm3922-201ENSMUST00000200519 435 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Hba-a1-201ENSMUST00000093209 699 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm4891-201ENSMUST00000182279 912 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm8991-201ENSMUST00000073014 1075 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Ighv2-5-201ENSMUST00000103449 347 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm14278-201ENSMUST00000117381 878 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm13527-201ENSMUST00000117926 691 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh23Q99PF4 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Gm11701-201ENSMUST00000121277 1142 ntBASIC10.65□□□□□ -0.7
Cdh23Q99PF4 CT025689.5-201ENSMUST00000224316 986 ntBASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh23Q99PF4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh23Q99PF4 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh23Q99PF4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh23Q99PF4 Gm9075-201ENSMUST00000168738 794 ntBASIC10.65□□□□□ -0.71
Cdh23Q99PF4 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh23Q99PF4 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC10.65□□□□□ -0.71
Cdh23Q99PF4 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC10.65□□□□□ -0.71
Cdh23Q99PF4 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms