Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm12337-201ENSMUST00000119634 400 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm12266-201ENSMUST00000120311 962 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Mir7085-201ENSMUST00000184353 66 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Thumpd1Q99J36 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Gm7783-201ENSMUST00000204795 781 ntBASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Thumpd1Q99J36 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Thumpd1Q99J36 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms